Principles and Methods of Sequence Analysis – Sequence – Evolution – Function – NCBI Bookshelf
Via Scoop.it – Virology and Bioinformatics from Virology.ca
“This chapter is the longest in the book as it deals with both general principles and practical aspects of sequence and, to a lesser degree, structure analysis. Although these methods are not, in themselves, part of genomics, no reasonable genome analysis and annotation would be possible without understanding how these methods work and having some practical experience with their use…..”